STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI64711.1KEGG: nwi:Nwi_0302 Flp pilus assembly CpaB. (278 aa)    
Predicted Functional Partners:
ABI64712.1
PFAM: type II and III secretion system protein; transport-associated; KEGG: ccr:CC2945 pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.989
ABI64714.1
Response regulator receiver protein; KEGG: ccr:CC2943 pilus assembly protein CpaE.
 
  
 0.988
ABI64716.1
PFAM: type II secretion system protein; KEGG: ccr:CC2941 hypothetical protein.
 
  
 0.984
ABI64717.1
PFAM: type II secretion system protein; KEGG: ccr:CC2940 hypothetical protein.
 
  
 0.982
ABI64715.1
PFAM: type II secretion system protein E; KEGG: ccr:CC2942 pilus assembly protein CpaF.
 
  
 0.973
ABI64710.1
PFAM: peptidase A24A, prepilin type IV; KEGG: ccr:CC2947 prepilin peptidase CpaA.
 
  
 0.964
ABI64709.1
PFAM: Flp/Fap pilin component; KEGG: sat:SYN_01488 flp/fap pilin component.
 
  
 0.958
ABI64713.1
TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: ccr:CC2944 pilus assembly protein CpaD.
 
     0.932
ABI64707.1
PFAM: TadE family protein; KEGG: rpd:RPD_3515 TadE-like.
 
  
 0.929
ABI66888.1
KEGG: mag:amb3752 Flp pilus assembly protein TadG.
 
  
 0.880
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.