STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI65044.1KEGG: pae:PA2927 hypothetical protein. (492 aa)    
Predicted Functional Partners:
ABI65045.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpa:RPA3441 enoyl-CoA hydratase/isomerase family protein.
   
 
 0.707
ABI66594.1
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: eba:ebA578 predicted subtilase.
 
   
 0.693
ABI64330.1
KEGG: cgb:cg1702 hypothetical protein.
  
     0.601
rpmA
PFAM: ribosomal protein L27; KEGG: nar:Saro_0930 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.596
rplL
LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
   
   0.593
rplT
LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
   0.588
ABI65172.1
KEGG: syd:Syncc9605_0016 methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.
    
   0.588
rpmG
PFAM: ribosomal protein L33; KEGG: jan:Jann_1225 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.588
rpsI
PFAM: ribosomal protein S9; KEGG: ccr:CC1377 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.588
rplQ
PFAM: ribosomal protein L17; KEGG: bms:BR1208 ribosomal protein L17.
    
   0.588
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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