STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI65158.1PFAM: extracellular solute-binding protein, family 5; KEGG: hch:HCH_00703 ABC-type oligopeptide transport system, periplasmic component. (544 aa)    
Predicted Functional Partners:
ABI65154.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A0591 binding-protein-dependent transport systems inner membrane component.
 
 0.996
ABI65155.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00701 ABC-type dipeptide/oligopeptide/nickel transport system, permease components.
 
 0.987
ABI66425.1
PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMb21196 putative oligopeptide uptake ABC transporter periplasmic solute-binding protein precursor.
  
  
 
0.923
ABI66892.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sil:SPO2813 peptide/nickel/opine uptake family ABC transporter, ATP-binding protein, putative; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.785
ABI65159.1
KEGG: cps:CPS_4814 hypothetical protein.
       0.630
ABI65157.1
KEGG: ccr:CC2822 hypothetical protein.
       0.550
ABI65156.1
Hypothetical protein; KEGG: syd:Syncc9605_2009 dihydrolipoamide acetyltransferase.
       0.531
ispDF
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
     
 0.421
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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