STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI65548.1PFAM: regulatory protein, TetR; KEGG: ccr:CC1855 transcriptional regulator, TetR family. (207 aa)    
Predicted Functional Partners:
ABI65547.1
PFAM: phospholipid/glycerol acyltransferase; KEGG: ccr:CC1856 acyltransferase family protein.
 
     0.718
ABI65546.1
PFAM: phospholipid/glycerol acyltransferase; KEGG: ccr:CC1856 acyltransferase family protein.
 
     0.645
ABI65545.1
PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA3471 hypothetical protein.
 
     0.614
ABI66510.1
PAS/PAC sensor hybrid histidine kinase; KEGG: cvi:CV1621 probable sensor/response regulatory hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
    
 
 0.418
ABI65355.1
PFAM: regulatory protein, TetR; KEGG: aba:Acid345_4024 transcriptional regulator, TetR family.
  
     0.402
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.