STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI65642.1KEGG: nar:Saro_0932 FF domain protein. (287 aa)    
Predicted Functional Partners:
ABI65708.1
KEGG: bur:Bcep18194_A4478 hypothetical protein.
  
     0.703
ABI66942.1
KEGG: eli:ELI_10140 hypothetical protein.
  
     0.633
ABI65431.1
KEGG: ccr:CC2569 monooxygenase, flavin-binding family.
 
     0.603
ABI66043.1
PFAM: fatty acid desaturase; KEGG: eli:ELI_10325 hypothetical protein.
 
     0.586
ABI64840.1
KEGG: eli:ELI_11930 glutathione S-transferase.
  
     0.580
ABI66432.1
PFAM: Saccharopine dehydrogenase; KEGG: nwi:Nwi_1410 saccharopine dehydrogenase.
  
     0.563
ABI66609.1
Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: nfa:pnf1370 putative DNA-binding protein.
  
     0.465
ABI64508.1
KEGG: nfa:nfa53570 hypothetical protein.
  
     0.418
ABI64377.1
PFAM: ferredoxin; KEGG: ccr:CC3524 ferredoxin, 2Fe-2S.
 
     0.401
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.