STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI65716.1PFAM: Cupin 2, conserved barrel domain protein; KEGG: bja:blr5564 hypothetical protein. (123 aa)    
Predicted Functional Partners:
ABI65973.1
PFAM: sugar transferase; KEGG: ccr:CC2425 hypothetical protein.
  
  
 0.798
ABI65715.1
KEGG: mlo:mlr4389 hypothetical protein.
 
     0.611
ABI66755.1
PFAM: Nucleotidyl transferase; KEGG: mag:amb0156 dTDP-glucose pyrophosphorylase.
 
  
 0.597
ABI65717.1
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: sil:SPO2222 pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase, putative.
  
  
 0.507
ABI65714.1
PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: tcx:Tcr_0041 2OG-Fe(II) oxygenase.
       0.474
ABI65957.1
KEGG: aba:Acid345_0515 hypothetical protein.
  
     0.418
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.