STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI65922.1KEGG: sma:SAV2953 hypothetical protein. (363 aa)    
Predicted Functional Partners:
ABI65604.1
PFAM: aminotransferase, class V; KEGG: ccr:CC1865 aminotransferase, class V.
   
 
 0.901
cysN
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.727
ABI64803.1
KEGG: sde:Sde_3818 hypothetical protein.
  
     0.699
ABI66301.1
KEGG: tfu:Tfu_0569 hypothetical protein.
  
     0.586
ABI66300.1
KEGG: sde:Sde_0483 hypothetical protein.
  
     0.558
ABI66298.1
PFAM: glycosyl transferase, group 1; KEGG: sde:Sde_0485 putative glycosyl transferase.
  
     0.492
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
     
 0.456
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.456
ABI66769.1
KEGG: cvi:CV2105 hypothetical protein.
  
     0.456
ABI66299.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sde:Sde_0484 putative methyltransferase.
  
 
   0.446
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.