STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI66443.1TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; KEGG: ret:RHE_CH03001 hypothetical protein. (196 aa)    
Predicted Functional Partners:
ABI66442.1
PFAM: von Willebrand factor, type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: ret:RHE_CH03000 hypothetical protein.
 
   
 0.951
ABI66444.1
KEGG: syn:slr1753 hypothetical protein.
     
 0.579
ABI64407.1
PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: dar:Daro_2421 membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.
  
   
 0.471
ABI64510.1
PFAM: acyltransferase 3; KEGG: mlo:mll7336 acetyltransferase.
  
     0.469
ABI66445.1
L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cyb:CYB_0540 putative low specificity L-threonine aldolase.
       0.465
ABI64515.1
KEGG: mpa:MAP1235 hypothetical protein.
  
     0.446
ABI66441.1
PFAM: aminotransferase, class I and II; KEGG: ccr:CC1534 aspartate aminotransferase.
       0.407
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.