STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI66483.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: bja:bll0596 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (809 aa)    
Predicted Functional Partners:
ABI64586.1
PFAM: Rh family protein/ammonium transporter; KEGG: pub:SAR11_0818 ammonium transporter; TC 1.A.11.
 
      0.838
ABI64900.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: ccr:CC0710 hypothetical protein.
 
  
 0.817
ABI66510.1
PAS/PAC sensor hybrid histidine kinase; KEGG: cvi:CV1621 probable sensor/response regulatory hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.741
ABI65104.1
KEGG: rru:Rru_A1712 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.707
ABI66331.1
KEGG: rru:Rru_A1712 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.692
ABI64714.1
Response regulator receiver protein; KEGG: ccr:CC2943 pilus assembly protein CpaE.
   
    0.690
ABI66486.1
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ccr:CC2521 sensor histidine kinase/response regulator.
  
 0.638
ABI64929.1
KEGG: mag:amb1110 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein.
 
 
 0.637
ABI66593.1
Diguanylate cyclase/phosphodiesterase; PFAM: TPR repeat-containing protein; EAL domain protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: GGDEF domain containing protein; Tetratricopeptide domain protein; KEGG: vvu:VV20556 predicted signal transduction protein.
 
  
0.634
ABI64716.1
PFAM: type II secretion system protein; KEGG: ccr:CC2941 hypothetical protein.
   
    0.613
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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