STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI66590.1PFAM: nuclease (SNase domain protein); KEGG: rru:Rru_A0083 nuclease, SNase-like. (309 aa)    
Predicted Functional Partners:
ABI65540.1
KEGG: mag:amb2845 hypothetical protein.
  
     0.657
ABI66237.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.642
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.622
ABI64983.1
PFAM: flagellar hook-length control protein; KEGG: rpb:RPB_4117 flagellar hook-length control protein.
 
     0.618
ABI64964.1
KEGG: rpa:RPA1634 hypothetical protein.
  
     0.588
ABI66243.1
KEGG: ccr:CC2581 FliX protein.
  
     0.574
ABI66475.1
KEGG: ret:RHE_CH00876 hypothetical protein.
  
     0.539
ABI66233.1
KEGG: ccr:CC2058 hypothetical protein.
  
 
 
 0.535
ABI66135.1
KEGG: ccr:CC2323 hypothetical protein.
  
     0.533
ABI64322.1
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rru:Rru_A3372 tRNA/rRNA methyltransferase (SpoU).
  
     0.531
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.