STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI66892.1Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sil:SPO2813 peptide/nickel/opine uptake family ABC transporter, ATP-binding protein, putative; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (619 aa)    
Predicted Functional Partners:
ABI65154.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A0591 binding-protein-dependent transport systems inner membrane component.
  
 0.986
ABI65155.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00701 ABC-type dipeptide/oligopeptide/nickel transport system, permease components.
  
 0.984
ABI65158.1
PFAM: extracellular solute-binding protein, family 5; KEGG: hch:HCH_00703 ABC-type oligopeptide transport system, periplasmic component.
  
 0.785
ABI66425.1
PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMb21196 putative oligopeptide uptake ABC transporter periplasmic solute-binding protein precursor.
  
 0.776
ABI66891.1
PFAM: peptidase M16 domain protein; KEGG: ccr:CC2638 peptidase, M16 family; Belongs to the peptidase M16 family.
       0.557
ABI66890.1
PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: aba:Acid345_4533 peptidylprolyl isomerase, FKBP-type.
       0.507
ABI66893.1
KEGG: mac:MA1270 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
       0.462
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.