STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI66930.1PFAM: surface antigen (D15); KEGG: ccr:CC1603 putative outer membrane protein. (571 aa)    
Predicted Functional Partners:
ABI66931.1
PFAM: protein of unknown function DUF490; KEGG: ccr:CC1604 hypothetical protein.
 
 
 0.995
ABI66152.1
PFAM: porin, opacity type; OmpA/MotB domain protein; KEGG: ccr:CC3494 OmpA family protein.
 
   
 0.694
pal
OmpA/MotB domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.650
bamA
Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
   
 0.586
ABI66929.1
KEGG: atc:AGR_C_2945 anaerobic coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.583
ABI66933.1
PFAM: Mg2+ transporter protein, CorA family protein; KEGG: hch:HCH_06583 Mg2+ and Co2+ transporters.
       0.563
ABI66932.1
PFAM: MscS Mechanosensitive ion channel; KEGG: eba:ebA645 hypothetical protein.
  
    0.546
ABI64770.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: nmu:Nmul_A1840 RND efflux system, outer membrane lipoprotein, NodT.
  
   
 0.486
ABI64899.1
PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: ccr:CC0201 OmpA family protein.
  
   
 0.478
ABI65830.1
PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC1356 transcriptional regulator.
  
     0.425
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.