STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI67220.1PFAM: protein of unknown function DUF343; KEGG: ccr:CC0108 hypothetical protein; Belongs to the UPF0434 family. (63 aa)    
Predicted Functional Partners:
ABI67221.1
PFAM: protein of unknown function DUF971; KEGG: mag:amb0010 hypothetical protein.
 
     0.863
ABI67219.1
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ccr:CC0110 thioredoxin.
       0.823
ABI67218.1
Ala-tRNA(Pro) hydrolase; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ccr:CC0111 DNA-binding protein, putative.
 
     0.718
ABI67222.1
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sde:Sde_1334 oxidoreductase.
       0.684
ABI67223.1
KEGG: eli:ELI_10435 hypothetical protein.
       0.466
kdsB
3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
  
    0.417
ABI65105.1
PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: ret:RHE_CH01404 putative aminomethyltransferase protein (glycine cleavage); Belongs to the GcvT family.
  
   
 0.411
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.