STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI67311.1PFAM: GCN5-related N-acetyltransferase; KEGG: gox:GOX0774 ribosomal-protein-alanine acetyltransferase. (153 aa)    
Predicted Functional Partners:
ABI67310.1
PFAM: peptidase M22, glycoprotease; KEGG: ret:RHE_CH00380 probable O-sialoglycoprotein endopeptidase protein.
  
 
 0.904
fur
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: ccr:CC0057 ferric uptake regulation protein; Belongs to the Fur family.
       0.750
ABI67309.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: rsp:RSP_2214 nitrogen-fixing NifU.
       0.689
ABI67313.1
PFAM: major facilitator superfamily MFS_1; KEGG: lic:LIC12361 permease.
     
 0.569
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.548
ABI67308.1
KEGG: rru:Rru_A2501 conserved hypothetical cytosolic protein.
  
  
 0.543
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.530
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
  
 0.496
ABI67317.1
PFAM: CBS domain containing protein; transporter-associated region; KEGG: ccr:CC0053 CBS domain protein.
       0.468
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.445
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.