STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS47650.1Phage portal protein, HK97 family. (392 aa)    
Predicted Functional Partners:
SFS47730.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
   0.997
SFS47712.1
Phage major capsid protein, HK97 family.
 
 
 
 0.996
SFS47751.1
Head-tail adaptor.
 
   0.992
SFS47769.1
Protein of unknown function.
 
 
   0.992
SFS47790.1
Phage major tail protein, TP901-1 family.
 
   0.992
SFS47874.1
TIGR02217 family protein.
 
 
   0.991
SFS47891.1
Phage conserved hypothetical protein BR0599.
 
 
   0.991
SFS47935.1
Putative phage tail protein.
 
   0.991
SFS47693.1
Hypothetical protein.
 
   
 0.957
SFS85810.1
Protein of unknown function.
 
 
 
 0.918
Your Current Organism:
Sulfitobacter marinus
NCBI taxonomy Id: 394264
Other names: DSM 23422, JCM 13602, KCTC 12738, Sulfitobacter marinus Yoon et al. 2007, strain SW-265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.