STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT11916.1DNA-binding transcriptional regulator, MarR family. (160 aa)    
Predicted Functional Partners:
SFT11898.1
Hypothetical protein.
 
     0.831
SFT13548.1
feruloyl-CoA synthase.
  
     0.756
SFT11907.1
Enoyl-CoA hydratase/carnithine racemase.
  
     0.643
SFT05997.1
P-hydroxybenzoate 3-monooxygenase.
 
     0.604
SFT10760.1
Transcriptional regulator, MarR family.
  
     0.525
SFT13523.1
Tripartite ATP-independent transporter, DctQ component.
 
     0.450
SFT17153.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.443
SFT16937.1
4-carboxymuconolactone decarboxylase; Manually curated.
  
     0.437
SFT16929.1
Protocatechuate 3,4-dioxygenase, beta subunit; Manually curated.
 
     0.429
SFT16921.1
Protocatechuate 3,4-dioxygenase, alpha subunit; Manually curated.
 
     0.414
Your Current Organism:
Sulfitobacter marinus
NCBI taxonomy Id: 394264
Other names: DSM 23422, JCM 13602, KCTC 12738, Sulfitobacter marinus Yoon et al. 2007, strain SW-265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.