STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH16Cadherin 16. (839 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.700
JUP
Junction plakoglobin.
    
 0.616
ARVCF
ARVCF delta catenin family member.
    
 0.574
CTNND1
Catenin delta 1.
    
 0.574
CTNND2
Catenin delta 2.
    
 0.530
PKP4
Plakophilin 4.
    
 0.530
VCL
Vinculin.
    
 0.496
MIOX
Myo-inositol oxygenase.
   
  
 0.490
CTNNA1
Catenin alpha 1.
    
 0.478
CTNNA2
Catenin alpha 2.
    
 0.478
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.