STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSBOP00000000579Ribosomal_L18_c domain-containing protein. (292 aa)    
Predicted Functional Partners:
ENSSBOP00000015011
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.976
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.976
ENSSBOP00000037405
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.976
ENSSBOP00000007884
Uncharacterized protein.
  
 
 0.909
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.909
MRPL12
Mitochondrial ribosomal protein L12.
  
 
 0.909
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.905
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.905
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.903
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.902
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.