Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHST12Carbohydrate sulfotransferase. (414 aa)    
Predicted Functional Partners:
CHST13
Carbohydrate sulfotransferase.
     
0.901
CHST11
Carbohydrate sulfotransferase.
     
0.901
CHST7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.711
CSGALNACT2
Hexosyltransferase.
      
 0.707
NDST2
Uncharacterized protein.
      
 0.615
CSGALNACT1
Hexosyltransferase.
      
 0.569
EXTL2
Exostosin like glycosyltransferase 2.
      
 0.542
CHST15
Carbohydrate sulfotransferase 15.
      
 0.522
CHPF2
Hexosyltransferase.
      
 0.521
CHPF
Hexosyltransferase.
      
 0.521
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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