STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSBOP00000001258Cor1 domain-containing protein. (190 aa)    
Predicted Functional Partners:
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
   
 
 0.840
REC8
REC8 meiotic recombination protein.
    
 0.588
SYCP1
Synaptonemal complex protein 1.
    
 0.568
STAG3
Stromal antigen 3.
    
 0.559
SYCE3
Synaptonemal complex central element protein 3.
     
 0.553
KLHL1
Kelch like family member 1.
    
 0.523
SYCP2
Synaptonemal complex protein 2.
    
 0.523
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 0.517
SYCE2
Synaptonemal complex central element protein 2.
     
 0.507
BOLL
Boule homolog, RNA binding protein.
    
 
 0.505
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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