Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RHOFRas homolog family member F, filopodia associated. (295 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.871
VAMP3
Vesicle associated membrane protein 3.
   
 0.804
BAIAP2L2
BAI1 associated protein 2 like 2.
    
  0.804
RASL11B
RAS like family 11 member B.
    
 0.729
ITSN1
Intersectin 1.
    
 0.722
ARHGAP1
Rho GTPase activating protein 1.
    
 0.706
BAIAP2L1
Uncharacterized protein.
    
 0.703
ENSSBOP00000019204
Uncharacterized protein.
    
 0.703
RAB7A
RAB7A, member RAS oncogene family.
   
 0.696
AKAP12
A-kinase anchoring protein 12.
     
  0.689
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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