Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSD3Nuclear receptor binding SET domain protein 3. (1438 aa)    
Predicted Functional Partners:
BRD4
Bromodomain containing 4.
   
 0.939
CBX5
Chromobox 5.
    
 0.850
BRD3
Bromodomain containing 3.
   
 0.844
BRD2
Uncharacterized protein.
   
 0.799
ENSSBOP00000016102
Uncharacterized protein.
   
 0.750
GLI3
GLI family zinc finger 3.
   
 0.739
NFIX
Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.
    
 
 0.732
NSD1
Nuclear receptor binding SET domain protein 1.
    
 
 0.688
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
 0.681
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.681
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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