STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZXDCZXD family zinc finger C. (717 aa)    
Predicted Functional Partners:
WDR5
WD repeat domain 5.
   
  0.859
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
    
 0.721
RRAS
RAS related.
    
 0.632
CIITA
Class II major histocompatibility complex transactivator.
    
 0.606
FBXO38
F-box protein 38.
    
 
 0.601
FAM217A
Family with sequence similarity 217 member A.
      
 0.579
HAL
Histidine ammonia-lyase.
   
 
 0.559
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
     
 0.535
POGZ
Pogo transposable element derived with ZNF domain.
    
   0.533
FBXL4
F-box and leucine rich repeat protein 4.
    
 0.531
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.