Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXNL4AThioredoxin like 4A. (71 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA processing factor 6.
    
 0.995
PRPF8
Pre-mRNA processing factor 8.
    
 0.995
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.994
DDX23
DEAD-box helicase 23.
    
 0.992
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 0.989
PQBP1
Polyglutamine binding protein 1.
   
 0.971
CD2BP2
CD2 cytoplasmic tail binding protein 2.
   
 0.965
ZMAT2
Zinc finger matrin-type 2.
   
 0.962
WBP4
WW domain binding protein 4.
    
 0.957
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.935
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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