Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RRP7ARibosomal RNA processing 7 homolog A. (280 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein 6.
   
 0.999
ENSSBOP00000021327
Uncharacterized protein.
   
 0.989
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.988
WDR46
WD repeat domain 46.
   
 0.988
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 0.986
UTP4
UTP4 small subunit processome component.
   
 0.981
TBL3
Transducin beta like 3.
   
 0.976
UTP18
UTP18 small subunit processome component.
   
 0.976
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.975
WDR36
WD repeat domain 36.
   
 0.974
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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