Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHISA2Shisa family member 2. (295 aa)    
Predicted Functional Partners:
ZNF646
Zinc finger protein 646.
      
 0.527
CDC42EP5
Uncharacterized protein.
      
 0.478
INO80E
INO80 complex subunit E.
      
 0.469
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.469
ALKBH4
AlkB homolog 4, lysine demethylase.
      
 0.462
CPSF6
Cleavage and polyadenylation specific factor 6.
      
 0.454
AIFM1
Apoptosis inducing factor mitochondria associated 1.
      
 0.452
FKBP9
Peptidylprolyl isomerase.
      
 0.443
MEX3C
Mex-3 RNA binding family member C.
      
 0.439
WASF3
WASP family member 3.
      
 0.439
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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