STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHERPCalcium homeostasis endoplasmic reticulum protein. (928 aa)    
Predicted Functional Partners:
U2SURP
U2 snRNP associated SURP domain containing.
   
 0.985
PUF60
Poly(U) binding splicing factor 60.
   
 0.913
DDX46
DEAD-box helicase 46.
   
 
 0.905
DHX15
DEAH-box helicase 15.
   
 0.890
ENSSBOP00000013780
G-patch domain-containing protein.
   
 0.876
RBM17
G-patch domain-containing protein.
   
 0.876
SF3A2
Splicing factor 3a subunit 2.
   
 0.867
DHX8
DEAH-box helicase 8.
   
 0.813
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
 0.787
ENSSBOP00000004781
Uncharacterized protein.
   
 0.781
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.