Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARSB | IDS | ENSSBOP00000030400 | ENSSBOP00000003604 | Arylsulfatase B. | Sulfatase domain-containing protein. | 0.551 |
ARSB | MED10 | ENSSBOP00000030400 | ENSSBOP00000027625 | Arylsulfatase B. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.514 |
ARSB | MED14 | ENSSBOP00000030400 | ENSSBOP00000039199 | Arylsulfatase B. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.577 |
ARSB | MED17 | ENSSBOP00000030400 | ENSSBOP00000000710 | Arylsulfatase B. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.562 |
ARSB | MED21 | ENSSBOP00000030400 | ENSSBOP00000017972 | Arylsulfatase B. | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.556 |
ARSB | SUMF1 | ENSSBOP00000030400 | ENSSBOP00000029586 | Arylsulfatase B. | Sulfatase modifying factor 1. | 0.752 |
HPSE | HPSE2 | ENSSBOP00000018189 | ENSSBOP00000038515 | Heparanase. | Heparanase 2 (inactive). | 0.904 |
HPSE | IDS | ENSSBOP00000018189 | ENSSBOP00000003604 | Heparanase. | Sulfatase domain-containing protein. | 0.902 |
HPSE2 | HPSE | ENSSBOP00000038515 | ENSSBOP00000018189 | Heparanase 2 (inactive). | Heparanase. | 0.904 |
HPSE2 | IDS | ENSSBOP00000038515 | ENSSBOP00000003604 | Heparanase 2 (inactive). | Sulfatase domain-containing protein. | 0.902 |
IDS | ARSB | ENSSBOP00000003604 | ENSSBOP00000030400 | Sulfatase domain-containing protein. | Arylsulfatase B. | 0.551 |
IDS | HPSE | ENSSBOP00000003604 | ENSSBOP00000018189 | Sulfatase domain-containing protein. | Heparanase. | 0.902 |
IDS | HPSE2 | ENSSBOP00000003604 | ENSSBOP00000038515 | Sulfatase domain-containing protein. | Heparanase 2 (inactive). | 0.902 |
IDS | MED10 | ENSSBOP00000003604 | ENSSBOP00000027625 | Sulfatase domain-containing protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.514 |
IDS | MED14 | ENSSBOP00000003604 | ENSSBOP00000039199 | Sulfatase domain-containing protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.577 |
IDS | MED17 | ENSSBOP00000003604 | ENSSBOP00000000710 | Sulfatase domain-containing protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.562 |
IDS | MED21 | ENSSBOP00000003604 | ENSSBOP00000017972 | Sulfatase domain-containing protein. | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.556 |
IDS | MITD1 | ENSSBOP00000003604 | ENSSBOP00000025351 | Sulfatase domain-containing protein. | Microtubule interacting and trafficking domain containing 1. | 0.519 |
IDS | SUMF1 | ENSSBOP00000003604 | ENSSBOP00000029586 | Sulfatase domain-containing protein. | Sulfatase modifying factor 1. | 0.653 |
IDS | TXNDC9 | ENSSBOP00000003604 | ENSSBOP00000020271 | Sulfatase domain-containing protein. | Thioredoxin domain containing 9. | 0.517 |
page 1 of 3