STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX4Caudal type homeobox 4. (283 aa)    
Predicted Functional Partners:
TBPL2
TATA-box binding protein like 2.
   
 
 0.555
SLC7A3
Solute carrier family 7 member 3.
   
  
 0.517
PEX11G
Peroxisomal biogenesis factor 11 gamma.
      
 0.489
B3GLCT
Beta 3-glucosyltransferase.
      
 0.489
MEDAG
Mesenteric estrogen dependent adipogenesis.
      
 0.485
SLC16A2
Solute carrier family 16 member 2.
      
 0.485
SPATA22
Spermatogenesis associated 22.
      
 0.482
FGF4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.467
PRR16
Proline rich 16.
      
 0.450
OGG1
8-oxoguanine DNA glycosylase.
      
 0.437
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.