Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN9Calpain 9; Belongs to the peptidase C2 family. (690 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
   
 0.744
CAPNS1
Calpain small subunit 1.
   
 0.741
GKN1
Gastrokine 1.
      
 0.705
CAPN12
Calpain 12; Belongs to the peptidase C2 family.
    
  0.659
CAPN11
Calpain 11; Belongs to the peptidase C2 family.
    
  0.621
C1QTNF12
C1q and TNF related 12.
      
 0.618
SAMD4B
Sterile alpha motif domain containing 4B.
      
 0.618
CAPN2
Calpain 2; Belongs to the peptidase C2 family.
    
 0.607
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
   
 
 0.594
NEB
Nebulin.
   
  
 0.546
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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