STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN9Calpain 9; Belongs to the peptidase C2 family. (690 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
0.689
CAST
Calpastatin.
   
 0.673
ITSN2
Intersectin 2.
   
 
  0.586
GKN1
Gastrokine 1.
      
 0.560
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
   
 0.559
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.501
C1QTNF12
C1q and TNF related 12.
      
 0.456
SAMD4B
Sterile alpha motif domain containing 4B.
      
 0.456
DCAF17
DDB1 and CUL4 associated factor 17.
      
 0.453
ENSSBOP00000019445
Uncharacterized protein.
   
 0.452
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.