MYBPH protein (Saimiri boliviensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MYBPH

Myosin binding protein H. (415 aa)

Predicted Functional Partners:

OCA2

0.598

CD46

0.597

GLDC

0.597

SLAMF1

0.597

C3

0.487

ENSSBOP00000018340

0.487

AMT

0.487

Your Current Organism:

Saimiri boliviensis

NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMT	GLDC	ENSSBOP00000021783	ENSSBOP00000036351	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.999
AMT	MYBPH	ENSSBOP00000021783	ENSSBOP00000008937	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	Myosin binding protein H.	0.487
AMT	OCA2	ENSSBOP00000021783	ENSSBOP00000017055	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	OCA2 melanosomal transmembrane protein.	0.491
C3	CD46	ENSSBOP00000014999	ENSSBOP00000004693	Complement C3.	CD46 molecule.	0.975
C3	MYBPH	ENSSBOP00000014999	ENSSBOP00000008937	Complement C3.	Myosin binding protein H.	0.487
CD46	C3	ENSSBOP00000004693	ENSSBOP00000014999	CD46 molecule.	Complement C3.	0.975
CD46	MYBPH	ENSSBOP00000004693	ENSSBOP00000008937	CD46 molecule.	Myosin binding protein H.	0.597
CD46	SLAMF1	ENSSBOP00000004693	ENSSBOP00000040457	CD46 molecule.	Signaling lymphocytic activation molecule family member 1.	0.584
ENSSBOP00000018340	GLDC	ENSSBOP00000018340	ENSSBOP00000036351	Uncharacterized protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.988
ENSSBOP00000018340	MYBPH	ENSSBOP00000018340	ENSSBOP00000008937	Uncharacterized protein.	Myosin binding protein H.	0.487
ENSSBOP00000018340	OCA2	ENSSBOP00000018340	ENSSBOP00000017055	Uncharacterized protein.	OCA2 melanosomal transmembrane protein.	0.491
GLDC	AMT	ENSSBOP00000036351	ENSSBOP00000021783	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.999
GLDC	ENSSBOP00000018340	ENSSBOP00000036351	ENSSBOP00000018340	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Uncharacterized protein.	0.988
GLDC	MYBPH	ENSSBOP00000036351	ENSSBOP00000008937	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Myosin binding protein H.	0.597
GLDC	OCA2	ENSSBOP00000036351	ENSSBOP00000017055	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	OCA2 melanosomal transmembrane protein.	0.564
MYBPH	AMT	ENSSBOP00000008937	ENSSBOP00000021783	Myosin binding protein H.	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.487
MYBPH	C3	ENSSBOP00000008937	ENSSBOP00000014999	Myosin binding protein H.	Complement C3.	0.487
MYBPH	CD46	ENSSBOP00000008937	ENSSBOP00000004693	Myosin binding protein H.	CD46 molecule.	0.597
MYBPH	ENSSBOP00000018340	ENSSBOP00000008937	ENSSBOP00000018340	Myosin binding protein H.	Uncharacterized protein.	0.487
MYBPH	GLDC	ENSSBOP00000008937	ENSSBOP00000036351	Myosin binding protein H.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.597