STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USHBP1USH1 protein network component harmonin binding protein 1. (624 aa)    
Predicted Functional Partners:
MMRN2
Multimerin 2.
   
  
 0.780
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
    
 0.596
FNDC1
Fibronectin type III domain containing 1.
    
 0.596
NEO1
Neogenin 1.
    
 0.596
IGDCC3
Immunoglobulin superfamily DCC subclass member 3.
    
 0.596
DCC
DCC netrin 1 receptor.
    
 0.596
MCCC2
Methylcrotonoyl-CoA carboxylase 2.
      
 0.564
USH1C
USH1 protein network component harmonin.
    
 
 0.542
ZBTB25
Zinc finger and BTB domain containing 25.
      
 0.527
GMCL1
BTB domain-containing protein.
    
 
 0.517
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.