Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDN1 | MMP2 | ENSSBOP00000008782 | ENSSBOP00000031465 | Endothelin 1. | Matrix metallopeptidase 2. | 0.920 |
EDN1 | MMP9 | ENSSBOP00000008782 | ENSSBOP00000009376 | Endothelin 1. | Matrix metallopeptidase 9. | 0.931 |
EDN1 | SRC | ENSSBOP00000008782 | ENSSBOP00000026582 | Endothelin 1. | Tyrosine-protein kinase. | 0.401 |
HBEGF | MMP2 | ENSSBOP00000028221 | ENSSBOP00000031465 | Heparin binding EGF like growth factor. | Matrix metallopeptidase 2. | 0.915 |
HBEGF | MMP9 | ENSSBOP00000028221 | ENSSBOP00000009376 | Heparin binding EGF like growth factor. | Matrix metallopeptidase 9. | 0.930 |
MMP1 | MMP2 | ENSSBOP00000035927 | ENSSBOP00000031465 | Matrix metallopeptidase 1. | Matrix metallopeptidase 2. | 0.959 |
MMP1 | MMP3 | ENSSBOP00000035927 | ENSSBOP00000033939 | Matrix metallopeptidase 1. | Matrix metallopeptidase 3. | 0.964 |
MMP1 | MMP9 | ENSSBOP00000035927 | ENSSBOP00000009376 | Matrix metallopeptidase 1. | Matrix metallopeptidase 9. | 0.956 |
MMP1 | TIMP3 | ENSSBOP00000035927 | ENSSBOP00000006215 | Matrix metallopeptidase 1. | TIMP metallopeptidase inhibitor 3. | 0.588 |
MMP2 | EDN1 | ENSSBOP00000031465 | ENSSBOP00000008782 | Matrix metallopeptidase 2. | Endothelin 1. | 0.920 |
MMP2 | HBEGF | ENSSBOP00000031465 | ENSSBOP00000028221 | Matrix metallopeptidase 2. | Heparin binding EGF like growth factor. | 0.915 |
MMP2 | MMP1 | ENSSBOP00000031465 | ENSSBOP00000035927 | Matrix metallopeptidase 2. | Matrix metallopeptidase 1. | 0.959 |
MMP2 | MMP9 | ENSSBOP00000031465 | ENSSBOP00000009376 | Matrix metallopeptidase 2. | Matrix metallopeptidase 9. | 0.933 |
MMP2 | SRC | ENSSBOP00000031465 | ENSSBOP00000026582 | Matrix metallopeptidase 2. | Tyrosine-protein kinase. | 0.937 |
MMP2 | THBS1 | ENSSBOP00000031465 | ENSSBOP00000034039 | Matrix metallopeptidase 2. | Thrombospondin 1. | 0.946 |
MMP2 | TIMP3 | ENSSBOP00000031465 | ENSSBOP00000006215 | Matrix metallopeptidase 2. | TIMP metallopeptidase inhibitor 3. | 0.971 |
MMP2 | VEGFA | ENSSBOP00000031465 | ENSSBOP00000028883 | Matrix metallopeptidase 2. | PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. | 0.928 |
MMP3 | MMP1 | ENSSBOP00000033939 | ENSSBOP00000035927 | Matrix metallopeptidase 3. | Matrix metallopeptidase 1. | 0.964 |
MMP3 | MMP9 | ENSSBOP00000033939 | ENSSBOP00000009376 | Matrix metallopeptidase 3. | Matrix metallopeptidase 9. | 0.942 |
MMP3 | TIMP3 | ENSSBOP00000033939 | ENSSBOP00000006215 | Matrix metallopeptidase 3. | TIMP metallopeptidase inhibitor 3. | 0.701 |
page 1 of 3