STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC22CWC22 spliceosome associated protein homolog. (885 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.998
SLU7
SLU7 homolog, splicing factor.
   
 0.997
DHX38
DEAH-box helicase 38.
   
 0.997
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 0.996
BUD31
BUD31 homolog.
   
 0.996
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.995
YJU2
YJU2 splicing factor homolog.
    
 0.993
CWC27
CWC27 spliceosome associated cyclophilin.
   
 0.992
PRPF19
Pre-mRNA processing factor 19.
   
 0.991
SRRM2
Serine/arginine repetitive matrix 2.
    
 0.991
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.