STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRG4Proline rich and Gla domain 4. (226 aa)    
Predicted Functional Partners:
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.517
IRF6
Interferon regulatory factor 6.
      
 0.514
SCRT1
Scratch family transcriptional repressor 1.
      
 0.508
MKX
Mohawk homeobox.
      
 0.480
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.480
ATRX
ATRX chromatin remodeler.
      
 0.469
GATAD2B
GATA zinc finger domain containing 2B.
      
 0.444
NDFIP1
Nedd4 family interacting protein 1.
      
 0.439
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.