Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSBOP00000010063Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
   
 0.967
TRIM33
Tripartite motif containing 33.
   
 0.820
TRIM24
Tripartite motif containing 24.
   
 0.731
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.692
CLYBL
Citrate lyase beta like.
    
 0.648
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
      
 0.627
ZZZ3
Uncharacterized protein.
   
 
 0.500
ENSSBOP00000034471
Uncharacterized protein.
   
 
 0.500
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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