Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP6V1FNBATP6V1F neighbor. (176 aa)    
Predicted Functional Partners:
TEX49
Testis expressed 49.
  
 
   0.797
WDR90
WD repeat domain 90.
    
   0.725
CST11
Cystatin 11.
      
 0.706
EFHB
EF-hand domain family member B.
    
   0.698
TEX43
Testis expressed 43.
    
   0.698
C1orf158
Chromosome 1 open reading frame 158.
    
   0.698
SPAG8
Sperm associated antigen 8.
    
   0.698
TEPP
Testis, prostate and placenta expressed.
    
   0.698
C9orf135
Chromosome 9 open reading frame 135.
    
   0.698
C4orf45
Chromosome 4 open reading frame 45.
    
   0.698
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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