STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSBOP00000010145Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1.
   
 
 0.669
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.654
SRSF1
Uncharacterized protein.
   
 0.646
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.595
ENSSBOP00000021076
RRM domain-containing protein.
   
 0.595
ENSSBOP00000001116
ROKNT domain-containing protein.
   
 0.588
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.588
TRA2B
Transformer 2 beta homolog.
   
 0.582
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.574
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.569
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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