Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAMD4ASterile alpha motif domain containing 4A. (718 aa)    
Predicted Functional Partners:
SAMD4B
Sterile alpha motif domain containing 4B.
    
   0.889
YWHAE
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon; Belongs to the 14-3-3 family.
    
   0.841
RBM42
RNA binding motif protein 42.
      
 0.642
ACO1
Aconitase 1; Belongs to the aconitase/IPM isomerase family.
    
 
 0.640
MRLN
Myoregulin.
      
 0.630
STAU1
Staufen double-stranded RNA binding protein 1.
      
 0.563
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
    
 
 0.551
YWHAG
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma; Belongs to the 14-3-3 family.
    
   0.535
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta; Belongs to the 14-3-3 family.
    
   0.535
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1.
    
 
 0.524
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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