STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTBK1Tau tubulin kinase 1. (1410 aa)    
Predicted Functional Partners:
LTV1
LTV1 ribosome biogenesis factor.
    
 0.793
C20orf194
Chromosome 20 open reading frame 194.
      
 0.767
BYSL
Bystin like.
    
 0.716
RIOK2
RIO kinase 2.
    
 0.707
TSR1
TSR1 ribosome maturation factor.
    
 0.656
VPS26A
VPS26, retromer complex component A.
      
 0.618
DAG1
Dystroglycan 1.
      
 0.618
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.617
ITSN1
Intersectin 1.
      
 0.599
ENSSBOP00000015011
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.490
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.