Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APH1A | APH1B | ENSSBOP00000017038 | ENSSBOP00000027603 | Aph-1 homolog A, gamma-secretase subunit. | Aph-1 homolog B, gamma-secretase subunit. | 0.935 |
APH1A | APP | ENSSBOP00000017038 | ENSSBOP00000028427 | Aph-1 homolog A, gamma-secretase subunit. | Amyloid beta precursor protein. | 0.793 |
APH1A | NCSTN | ENSSBOP00000017038 | ENSSBOP00000036806 | Aph-1 homolog A, gamma-secretase subunit. | Nicastrin. | 0.998 |
APH1A | NOTCH1 | ENSSBOP00000017038 | ENSSBOP00000015997 | Aph-1 homolog A, gamma-secretase subunit. | Notch receptor 1. | 0.902 |
APH1A | PSEN1 | ENSSBOP00000017038 | ENSSBOP00000013374 | Aph-1 homolog A, gamma-secretase subunit. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.998 |
APH1A | PSEN2 | ENSSBOP00000017038 | ENSSBOP00000024638 | Aph-1 homolog A, gamma-secretase subunit. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.998 |
APH1A | PSENEN | ENSSBOP00000017038 | ENSSBOP00000011213 | Aph-1 homolog A, gamma-secretase subunit. | Presenilin enhancer, gamma-secretase subunit. | 0.998 |
APH1B | APH1A | ENSSBOP00000027603 | ENSSBOP00000017038 | Aph-1 homolog B, gamma-secretase subunit. | Aph-1 homolog A, gamma-secretase subunit. | 0.935 |
APH1B | APP | ENSSBOP00000027603 | ENSSBOP00000028427 | Aph-1 homolog B, gamma-secretase subunit. | Amyloid beta precursor protein. | 0.623 |
APH1B | NCSTN | ENSSBOP00000027603 | ENSSBOP00000036806 | Aph-1 homolog B, gamma-secretase subunit. | Nicastrin. | 0.998 |
APH1B | NOTCH1 | ENSSBOP00000027603 | ENSSBOP00000015997 | Aph-1 homolog B, gamma-secretase subunit. | Notch receptor 1. | 0.830 |
APH1B | PSEN1 | ENSSBOP00000027603 | ENSSBOP00000013374 | Aph-1 homolog B, gamma-secretase subunit. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.997 |
APH1B | PSEN2 | ENSSBOP00000027603 | ENSSBOP00000024638 | Aph-1 homolog B, gamma-secretase subunit. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.997 |
APH1B | PSENEN | ENSSBOP00000027603 | ENSSBOP00000011213 | Aph-1 homolog B, gamma-secretase subunit. | Presenilin enhancer, gamma-secretase subunit. | 0.997 |
APP | APH1A | ENSSBOP00000028427 | ENSSBOP00000017038 | Amyloid beta precursor protein. | Aph-1 homolog A, gamma-secretase subunit. | 0.793 |
APP | APH1B | ENSSBOP00000028427 | ENSSBOP00000027603 | Amyloid beta precursor protein. | Aph-1 homolog B, gamma-secretase subunit. | 0.623 |
APP | CTNNB1 | ENSSBOP00000028427 | ENSSBOP00000025816 | Amyloid beta precursor protein. | Catenin beta 1. | 0.462 |
APP | GSK3B | ENSSBOP00000028427 | ENSSBOP00000012484 | Amyloid beta precursor protein. | Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily. | 0.547 |
APP | NCSTN | ENSSBOP00000028427 | ENSSBOP00000036806 | Amyloid beta precursor protein. | Nicastrin. | 0.946 |
APP | NOTCH1 | ENSSBOP00000028427 | ENSSBOP00000015997 | Amyloid beta precursor protein. | Notch receptor 1. | 0.470 |
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