Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL5 | PCMTD2 | ENSSBOP00000035006 | ENSSBOP00000014195 | Cullin 5; Belongs to the cullin family. | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | 0.429 |
GART | PCMTD2 | ENSSBOP00000022892 | ENSSBOP00000014195 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | 0.408 |
PCMTD2 | CUL5 | ENSSBOP00000014195 | ENSSBOP00000035006 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | Cullin 5; Belongs to the cullin family. | 0.429 |
PCMTD2 | GART | ENSSBOP00000014195 | ENSSBOP00000022892 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.408 |
PCMTD2 | TYW1 | ENSSBOP00000014195 | ENSSBOP00000018516 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | Flavodoxin-like domain-containing protein. | 0.410 |
TYW1 | PCMTD2 | ENSSBOP00000018516 | ENSSBOP00000014195 | Flavodoxin-like domain-containing protein. | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | 0.410 |