STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPHN1Oligophrenin 1. (802 aa)    
Predicted Functional Partners:
STOX2
Storkhead box 2.
   
  
 0.466
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
      
 0.465
ENSSBOP00000002754
Uncharacterized protein.
    
 0.423
ENSSBOP00000003434
Uncharacterized protein.
    
 0.423
CDC42
Uncharacterized protein.
    
 0.423
ENSSBOP00000040512
Uncharacterized protein.
    
 0.423
RPS6KA6
Ribosomal protein S6 kinase.
   
  
 0.410
GINM1
Glycoprotein integral membrane 1.
      
 0.408
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.