STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN1Reticulon. (776 aa)    
Predicted Functional Partners:
VSNL1
Visinin like 1.
   
  
 0.759
MAPT
Microtubule-associated protein.
   
  
 0.733
MANF
Mesencephalic astrocyte derived neurotrophic factor.
    
 
 0.693
CTNNB1
Catenin beta 1.
      
 0.670
ATN1
Atrophin 1.
      
 0.669
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.665
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.624
CCS
Copper chaperone for superoxide dismutase.
      
 0.618
CD302
CD302 molecule.
      
 0.618
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.617
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.