Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DKC1 | GCH1 | ENSSBOP00000035204 | ENSSBOP00000018628 | Dyskerin pseudouridine synthase 1. | GTP cyclohydrolase 1. | 0.440 |
DKC1 | GTPBP3 | ENSSBOP00000035204 | ENSSBOP00000000748 | Dyskerin pseudouridine synthase 1. | GTP binding protein 3, mitochondrial. | 0.446 |
DKC1 | METTL1 | ENSSBOP00000035204 | ENSSBOP00000004611 | Dyskerin pseudouridine synthase 1. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.739 |
DKC1 | QTRT1 | ENSSBOP00000035204 | ENSSBOP00000001392 | Dyskerin pseudouridine synthase 1. | Queuine tRNA-ribosyltransferase catalytic subunit 1. | 0.506 |
DKC1 | QTRT2 | ENSSBOP00000035204 | ENSSBOP00000015779 | Dyskerin pseudouridine synthase 1. | Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. | 0.506 |
DKC1 | TRIT1 | ENSSBOP00000035204 | ENSSBOP00000015463 | Dyskerin pseudouridine synthase 1. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. | 0.406 |
DKC1 | TRMU | ENSSBOP00000035204 | ENSSBOP00000027538 | Dyskerin pseudouridine synthase 1. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.421 |
DKC1 | TRUB1 | ENSSBOP00000035204 | ENSSBOP00000014991 | Dyskerin pseudouridine synthase 1. | TruB pseudouridine synthase family member 1. | 0.518 |
DKC1 | TRUB2 | ENSSBOP00000035204 | ENSSBOP00000011232 | Dyskerin pseudouridine synthase 1. | TruB pseudouridine synthase family member 2. | 0.497 |
GCH1 | DKC1 | ENSSBOP00000018628 | ENSSBOP00000035204 | GTP cyclohydrolase 1. | Dyskerin pseudouridine synthase 1. | 0.440 |
GCH1 | GTPBP3 | ENSSBOP00000018628 | ENSSBOP00000000748 | GTP cyclohydrolase 1. | GTP binding protein 3, mitochondrial. | 0.453 |
GCH1 | QTRT1 | ENSSBOP00000018628 | ENSSBOP00000001392 | GTP cyclohydrolase 1. | Queuine tRNA-ribosyltransferase catalytic subunit 1. | 0.505 |
GCH1 | QTRT2 | ENSSBOP00000018628 | ENSSBOP00000015779 | GTP cyclohydrolase 1. | Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. | 0.505 |
GCH1 | TRMU | ENSSBOP00000018628 | ENSSBOP00000027538 | GTP cyclohydrolase 1. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.625 |
GCH1 | TRUB1 | ENSSBOP00000018628 | ENSSBOP00000014991 | GTP cyclohydrolase 1. | TruB pseudouridine synthase family member 1. | 0.440 |
GCH1 | TRUB2 | ENSSBOP00000018628 | ENSSBOP00000011232 | GTP cyclohydrolase 1. | TruB pseudouridine synthase family member 2. | 0.440 |
GTPBP3 | DKC1 | ENSSBOP00000000748 | ENSSBOP00000035204 | GTP binding protein 3, mitochondrial. | Dyskerin pseudouridine synthase 1. | 0.446 |
GTPBP3 | GCH1 | ENSSBOP00000000748 | ENSSBOP00000018628 | GTP binding protein 3, mitochondrial. | GTP cyclohydrolase 1. | 0.453 |
GTPBP3 | METTL1 | ENSSBOP00000000748 | ENSSBOP00000004611 | GTP binding protein 3, mitochondrial. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.612 |
GTPBP3 | QTRT1 | ENSSBOP00000000748 | ENSSBOP00000001392 | GTP binding protein 3, mitochondrial. | Queuine tRNA-ribosyltransferase catalytic subunit 1. | 0.538 |
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