Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACADSB | TCFL5 | ENSSBOP00000018918 | ENSSBOP00000019625 | Acyl-CoA dehydrogenase short/branched chain. | BHLH domain-containing protein. | 0.599 |
APC2 | TCFL5 | ENSSBOP00000009480 | ENSSBOP00000019625 | APC regulator of WNT signaling pathway 2. | BHLH domain-containing protein. | 0.463 |
ASMTL | TCFL5 | ENSSBOP00000033500 | ENSSBOP00000019625 | Acetylserotonin O-methyltransferase like. | BHLH domain-containing protein. | 0.601 |
CUX2 | TCFL5 | ENSSBOP00000016994 | ENSSBOP00000019625 | Homeobox protein cut-like. | BHLH domain-containing protein. | 0.508 |
ENSSBOP00000005780 | TCFL5 | ENSSBOP00000005780 | ENSSBOP00000019625 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | BHLH domain-containing protein. | 0.605 |
ENSSBOP00000015743 | TCFL5 | ENSSBOP00000015743 | ENSSBOP00000019625 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | BHLH domain-containing protein. | 0.605 |
NRF1 | TCFL5 | ENSSBOP00000011912 | ENSSBOP00000019625 | Nuclear respiratory factor 1. | BHLH domain-containing protein. | 0.437 |
TCFL5 | ACADSB | ENSSBOP00000019625 | ENSSBOP00000018918 | BHLH domain-containing protein. | Acyl-CoA dehydrogenase short/branched chain. | 0.599 |
TCFL5 | APC2 | ENSSBOP00000019625 | ENSSBOP00000009480 | BHLH domain-containing protein. | APC regulator of WNT signaling pathway 2. | 0.463 |
TCFL5 | ASMTL | ENSSBOP00000019625 | ENSSBOP00000033500 | BHLH domain-containing protein. | Acetylserotonin O-methyltransferase like. | 0.601 |
TCFL5 | CUX2 | ENSSBOP00000019625 | ENSSBOP00000016994 | BHLH domain-containing protein. | Homeobox protein cut-like. | 0.508 |
TCFL5 | ENSSBOP00000005780 | ENSSBOP00000019625 | ENSSBOP00000005780 | BHLH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.605 |
TCFL5 | ENSSBOP00000015743 | ENSSBOP00000019625 | ENSSBOP00000015743 | BHLH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.605 |
TCFL5 | NRF1 | ENSSBOP00000019625 | ENSSBOP00000011912 | BHLH domain-containing protein. | Nuclear respiratory factor 1. | 0.437 |
TCFL5 | TNPO2 | ENSSBOP00000019625 | ENSSBOP00000006015 | BHLH domain-containing protein. | Transportin 2. | 0.495 |
TNPO2 | TCFL5 | ENSSBOP00000006015 | ENSSBOP00000019625 | Transportin 2. | BHLH domain-containing protein. | 0.495 |