Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID4A | ARID4B | ENSSBOP00000021872 | ENSSBOP00000006479 | AT-rich interaction domain 4A. | AT-rich interaction domain 4B. | 0.558 |
ARID4A | CHD4 | ENSSBOP00000021872 | ENSSBOP00000008724 | AT-rich interaction domain 4A. | Uncharacterized protein. | 0.679 |
ARID4A | ENSSBOP00000021549 | ENSSBOP00000021872 | ENSSBOP00000021549 | AT-rich interaction domain 4A. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.893 |
ARID4A | HDAC2 | ENSSBOP00000021872 | ENSSBOP00000019047 | AT-rich interaction domain 4A. | Hist_deacetyl domain-containing protein. | 0.893 |
ARID4A | KDM1A | ENSSBOP00000021872 | ENSSBOP00000017475 | AT-rich interaction domain 4A. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.692 |
ARID4A | MBD2 | ENSSBOP00000021872 | ENSSBOP00000002242 | AT-rich interaction domain 4A. | Methyl-CpG binding domain protein 2. | 0.569 |
ARID4A | MTA1 | ENSSBOP00000021872 | ENSSBOP00000027735 | AT-rich interaction domain 4A. | Metastasis associated 1. | 0.677 |
ARID4A | MTA2 | ENSSBOP00000021872 | ENSSBOP00000006414 | AT-rich interaction domain 4A. | Metastasis associated 1 family member 2. | 0.677 |
ARID4A | RB1 | ENSSBOP00000021872 | ENSSBOP00000022740 | AT-rich interaction domain 4A. | RB transcriptional corepressor 1. | 0.897 |
ARID4A | SIN3A | ENSSBOP00000021872 | ENSSBOP00000021519 | AT-rich interaction domain 4A. | SIN3 transcription regulator family member A. | 0.940 |
ARID4B | ARID4A | ENSSBOP00000006479 | ENSSBOP00000021872 | AT-rich interaction domain 4B. | AT-rich interaction domain 4A. | 0.558 |
ARID4B | CHD4 | ENSSBOP00000006479 | ENSSBOP00000008724 | AT-rich interaction domain 4B. | Uncharacterized protein. | 0.679 |
ARID4B | ENSSBOP00000021549 | ENSSBOP00000006479 | ENSSBOP00000021549 | AT-rich interaction domain 4B. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.908 |
ARID4B | HDAC2 | ENSSBOP00000006479 | ENSSBOP00000019047 | AT-rich interaction domain 4B. | Hist_deacetyl domain-containing protein. | 0.918 |
ARID4B | KDM1A | ENSSBOP00000006479 | ENSSBOP00000017475 | AT-rich interaction domain 4B. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.692 |
ARID4B | MBD2 | ENSSBOP00000006479 | ENSSBOP00000002242 | AT-rich interaction domain 4B. | Methyl-CpG binding domain protein 2. | 0.569 |
ARID4B | MTA1 | ENSSBOP00000006479 | ENSSBOP00000027735 | AT-rich interaction domain 4B. | Metastasis associated 1. | 0.712 |
ARID4B | MTA2 | ENSSBOP00000006479 | ENSSBOP00000006414 | AT-rich interaction domain 4B. | Metastasis associated 1 family member 2. | 0.690 |
ARID4B | RB1 | ENSSBOP00000006479 | ENSSBOP00000022740 | AT-rich interaction domain 4B. | RB transcriptional corepressor 1. | 0.894 |
ARID4B | SIN3A | ENSSBOP00000006479 | ENSSBOP00000021519 | AT-rich interaction domain 4B. | SIN3 transcription regulator family member A. | 0.950 |
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