STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNT1Troponin T1, slow skeletal type. (239 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
  
 0.938
TNNI2
Troponin I2, fast skeletal type.
   
 0.936
TNNI1
Troponin I1, slow skeletal type.
  
 0.931
TNNC2
Troponin C2, fast skeletal type.
   
 0.926
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.888
MYL1
Myosin light chain 1.
   
 0.866
DNAAF3
Dynein axonemal assembly factor 3.
   
 0.742
ENSSBOP00000019906
Uncharacterized protein.
  
 0.695
MYL3
Myosin light chain 3.
   
 0.650
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.648
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.