STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD1Polycystin 1, transient receptor potential channel interacting. (4166 aa)    
Predicted Functional Partners:
PKD2
Polycystin 2, transient receptor potential cation channel.
    
0.985
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
0.900
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
0.670
EXOC5
Exocyst complex component 5.
     
 0.608
TSC2
TSC complex subunit 2.
   
  
 0.593
MYOT
Myotilin.
    
 0.591
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.588
RHO
Rhodopsin.
     
 0.561
EXOC4
Exocyst complex component 4.
     
 0.560
EXOC8
Exocyst complex component 8.
     
 0.541
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.