STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSPC1Paraspeckle component 1. (454 aa)    
Predicted Functional Partners:
SFPQ
RRM domain-containing protein.
  
 
 
0.954
ENSSBOP00000035536
RRM domain-containing protein.
  
 
 
0.918
ENSSBOP00000014088
RRM domain-containing protein.
  
 
 
0.726
ENSSBOP00000034480
RRM domain-containing protein.
  
 
 
0.726
ENSSBOP00000010230
Uncharacterized protein.
  
 
 
0.725
ENSSBOP00000004644
RRM domain-containing protein.
    
 
0.723
ENSSBOP00000022320
RRM domain-containing protein.
    
 
0.723
NONO
Uncharacterized protein.
    
 
0.723
RBM14
RNA binding motif protein 14.
   
 
 0.655
STAB2
Stabilin 2.
      
 0.592
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.